DIRAS3可能是一种新的胶质瘤生物标记物并且与免疫浸润相关
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兰州大学第二医院

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本研究得到了国家自然科学基金(81960541)、甘肃省自然科学基金(22JR5RA959/22JR5RA966/ 2ZD6FA021-4)、兰州大学医学创新与发展项目(lzuyxcx-2022-170)、兰州市科技局项目(2021-RC-97)、兰州大学第二医院 "萃英 "大学生科学训练计划(CYXZ-01/CYXZ2020-08)、兰州大学第二医院 "萃英 "大学生科学训练计划(CYXZ-01/CYXZ2020-08)、 兰州市科技局项目(2021-RC-97)、兰州大学第二医院萃英本科生科学训练计划(CYXZ-01/CYXZ2020-08)、萃英研究生导师申请者培训计划(201803/ CYDSPY202-002)、甘肃省科技计划(21JR7RA411)。


DIRAS3 might function as a diagnostic biomarker and be related to immune infiltration in gliomas
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1.The Second Hospital of Lanzhou University;2.兰州大学第二医院

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    摘要:

    探索DIRAS3对胶质瘤患者预后的影响及其潜在机制。方法:我们在TCGA和CGGA数据库中提取了DIRAS3表达谱和临床数据,研究分析了DIRAS3在不同临床病理特征的胶质瘤患者中的mRNA表达水平,并探讨了其对总生存期和临床病理特征的影响。随后,我们收集了32例正常脑及胶质瘤组织标本,并采用Western blotting、免疫组化比较DIRAS3蛋白在不同等级胶质瘤和正常组织中的表达差异。通过基因本体论(GO)、京都基因与基因组百科全书(KEGG)、基因集富集分析(GSEA)和基因集变异分析(GSVA)等方法,我们对DIRAS3及其共表达基因可能的生物学功能和信号传导通路进行了深入探讨。最后,我们还探讨了DIRAS3与免疫细胞浸润程度以及免疫相关分子表达之间的关系。结果:DIRAS3在胶质瘤中的过表达现象明显,且其表达水平随世界卫生组织(WHO)分级升高而增加,并与患者的总生存率呈现负相关。通过生物信息学分析,DIRAS3的高表达与患者年龄、肿瘤分级、IDH状态以及1p/19q编码缺失有关。此外,DIRAS3相关表达基因富集在多种免疫相关通路中,参与调节免疫反应的多个过程。结论:DIRAS3不仅是胶质瘤的诊断和预后生物标志物,更是胶质瘤免疫疗法的关键靶点。通过深入研究DIRAS3,我们有望揭示胶质瘤的发病机制,为其治疗提供新的思路和方法。

    Abstract:

    OBJECTIVE: To explore the impact of DIRAS3 on the prognosis of glioma patients and its potential causes. METHODS: Based on TCGA and CGGA databases, we performed the extraction of DIRAS3 expression profiles and clinical data. The study analysed the mRNA expression levels of DIRAS3 in glioma patients with different clinicopathological features and investigated its impact on overall survival and clinicopathological features. Subsequently, we collected 32 normal brain and glioma tissue specimens, which were validated to compare the differences in DIRAS3 protein expression in different grades of gliomas and normal tissues. Through Gene Ontology (GO), Kyoto Encyclopedia of Genes and Genomes (KEGG), and Gene Set Enrichment Analysis (GSEA), we provided insights into the possible biological functions and signal transduction pathways of DIRAS3 and its co-expressed genes. Finally, we also explored the relationship between DIRAS3 and the degree of immune cell infiltration and the expression of immune-related molecules. RESULTS: Overexpression of DIRAS3 was evident in gliomas, and its expression level increased with the elevated World Health Organization (WHO) classification and showed a negative correlation with the overall survival of patients. In addition, the high expression of DIRAS3 was associated with patient age, tumour grade, IDH status, and 1p/19q coding deletion.DIRAS3 may influence the infiltration degree of multiple immune cells in the tumour microenvironment by regulating various processes of immune response. CONCLUSION: DIRAS3 is not only a diagnostic and prognostic biomarker for glioma, but also a key target for glioma immunotherapy. Through in-depth study of DIRAS3, we are expected to reveal the pathogenesis of glioma and provide new ideas and methods for its treatment.

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  • 收稿日期:2023-11-08
  • 最后修改日期:2024-04-03
  • 录用日期:2024-04-07
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